Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative flavoprotein | SAMEA3485113_03214 | Not Available | Negative | 3304383 - 3304979 | 20846.8 |
| stress-induced protein, kgg, repeat | SAMEA3485113_03215 | Not Available | Positive | 3305352 - 3305525 | 5883.55 |
| pyrimidine transporter | SAMEA3485113_03216 | Not Available | Negative | 3305608 - 3306936 | 45594.4 |
| oxidoreductase, flavin:nadh component | SAMEA3485113_03217 | Not Available | Negative | 3306957 - 3307451 | 17748.3 |
| putative nadh dehydrogenase/nad(p)h nitroreductase (pyrimidine utilization protein e) | SAMEA3485113_03218 | Not Available | Negative | 3307462 - 3308052 | 21598.5 |
| alternative pyrimidine degradation pathway protein | SAMEA3485113_03219 | Not Available | Negative | 3308062 - 3308862 | 28999.9 |
| pyrimidine utilization protein c | SAMEA3485113_03220 | Not Available | Negative | 3308870 - 3309256 | 13763.6 |
| isochorismatase family protein ycdl | SAMEA3485113_03221 | Not Available | Negative | 3309268 - 3309963 | 25361.2 |
| monooxygenase ycdm | SAMEA3485113_03222 | Not Available | Negative | 3309960 - 3311051 | 39903.4 |
| transcriptional regulator ycdc | SAMEA3485113_03223 | Not Available | Positive | 3311339 - 3311977 | 23688.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





