Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| solute-binding periplasmic protein | SAMEA3485113_03204 | Not Available | Positive | 3293531 - 3294559 | 37920.9 |
| two-component response regulator | SAMEA3485113_03205 | Not Available | Negative | 3294532 - 3295224 | 26220.9 |
| cytochrome c-type protein torc | SAMEA3485113_03206 | Not Available | Positive | 3295354 - 3296526 | 43658.9 |
| trimethylamine-n-oxide reductase precursor | SAMEA3485113_03207 | Not Available | Positive | 3296526 - 3299072 | 94511.1 |
| chaperone protein tord | SAMEA3485113_03208 | Not Available | Positive | 3299069 - 3299668 | 22491.7 |
| chaperone-modulator protein | SAMEA3485113_03209 | Not Available | Negative | 3299820 - 3300125 | 11512.9 |
| curved dna-binding protein | SAMEA3485113_03210 | Not Available | Negative | 3300118 - 3301044 | 34658.1 |
| ycce | SAMEA3485113_03211 | Not Available | Positive | 3301304 - 3302563 | 48283.8 |
| glucose-1-phosphatase | SAMEA3485113_03212 | Not Available | Positive | 3302856 - 3304097 | 45666.3 |
| putative cytoplasmic protein yccj | SAMEA3485113_03213 | Not Available | Negative | 3304135 - 3304362 | 8524.89 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





