Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase 1 maturation protease | SAMEA3485113_03193 | Not Available | Positive | 3282088 - 3282675 | 21484.6 |
| hydrogenase-1 operon protein | SAMEA3485113_03194 | Not Available | Positive | 3282672 - 3283070 | 14890.6 |
| hydrogenase-1 operon protein hyaf | SAMEA3485113_03195 | Not Available | Positive | 3283067 - 3283924 | 31350.4 |
| cytochrome bd-ii oxidase subunit i | SAMEA3485113_03196 | Not Available | Positive | 3284058 - 3285602 | 57897.1 |
| cytochrome bd-ii oxidase subunit 2 | SAMEA3485113_03197 | Not Available | Positive | 3285614 - 3286750 | 42398.3 |
| small predicted membrane protein | SAMEA3485113_03198 | Not Available | Positive | 3286763 - 3286855 | 3597.68 |
| periplasmic appa protein | SAMEA3485113_03199 | Not Available | Positive | 3286935 - 3288245 | 47574.1 |
| protein gnsa | SAMEA3485113_03201 | Not Available | Positive | 3289337 - 3289510 | 6575.99 |
| putative electron transport protein | SAMEA3485113_03202 | Not Available | Negative | 3289559 - 3290632 | 40145.4 |
| hybrid sensory histidine kinase tors | SAMEA3485113_03203 | Not Available | Negative | 3290704 - 3293403 | 99125.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





