Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative coa-binding protein | SAMEA3485113_03183 | Not Available | Positive | 3274264 - 3274677 | 14716.0 |
| dna-binding protein | SAMEA3485113_03184 | Not Available | Negative | 3274722 - 3275039 | 11779.9 |
| putative oxidoreductase | SAMEA3485113_03185 | Not Available | Negative | 3275097 - 3276287 | 44397.6 |
| acylphosphatase | SAMEA3485113_03186 | Not Available | Positive | 3276382 - 3276660 | 10314.4 |
| sulfurtransferase tuse | SAMEA3485113_03187 | Not Available | Negative | 3276657 - 3277043 | 14524.8 |
| putative carrier/transport protein | SAMEA3485113_03188 | Not Available | Negative | 3277077 - 3277736 | 23364.3 |
| Trna-ser | Not Available | Not Available | Positive | 3277943 - 3278030 | Not Available |
| hydrogenase 1, small subunit | SAMEA3485113_03190 | Not Available | Positive | 3278457 - 3279575 | 40683.6 |
| hydrogenase-1 large subunit | SAMEA3485113_03191 | Not Available | Positive | 3279572 - 3281365 | 66271.1 |
| ni/fe-hydrogenase 1 b-type cytochrome subunit | SAMEA3485113_03192 | Not Available | Positive | 3281384 - 3282091 | 27612.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





