Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toxin of the yeev-yeeu toxin-antitoxin system | SAMEA3485113_03162 | Not Available | Negative | 3257466 - 3257876 | 15235.2 |
| antitoxin of the yeev-yeeu toxin-antitoxin system | SAMEA3485113_03163 | Not Available | Negative | 3257967 - 3258335 | 13705.3 |
| antitoxin of the yeev-yeeu toxin-antitoxin system | SAMEA3485113_03164 | Not Available | Negative | 3258385 - 3258555 | 6290.22 |
| antitoxin of the yeev-yeeu toxin-antitoxin system | SAMEA3485113_03165 | Not Available | Negative | 3258552 - 3259019 | 18160.6 |
| cp4-44 prophage | SAMEA3485113_03166 | Not Available | Negative | 3259034 - 3259255 | 8381.18 |
| putative dna repair protein | SAMEA3485113_03167 | Not Available | Negative | 3259318 - 3259794 | 17676.4 |
| anti-restriction protein | SAMEA3485113_03168 | Not Available | Negative | 3259809 - 3260294 | 18179.3 |
| cp4-57 prophage protein | SAMEA3485113_03169 | Not Available | Negative | 3260386 - 3261204 | 31211.4 |
| putative atp/gtp-binding protein | SAMEA3485113_03170 | Not Available | Negative | 3261390 - 3262274 | 33208.9 |
| uncharacterised protein | SAMEA3485113_03171 | Not Available | Positive | 3262381 - 3263367 | 37756.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





