Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mutational suppressor of yhjh motility mutation, function uncharacterised | SAMEA3485113_03142 | Not Available | Negative | 3241284 - 3242162 | 32907.7 |
| putative vimentin | SAMEA3485113_03143 | Not Available | Negative | 3242159 - 3244387 | 84323.8 |
| alkylphosphonate uptake protein in phosphonate metabolism | SAMEA3485113_03144 | Not Available | Positive | 3244789 - 3245124 | 12345.7 |
| phnb protein | SAMEA3485113_03145 | Not Available | Positive | 3245284 - 3245727 | 16138.1 |
| phosphonate abc transporter atpase | SAMEA3485113_03146 | Not Available | Positive | 3245860 - 3246648 | 29457.4 |
| phosphonate abc transporter, substrate-binding protein | SAMEA3485113_03147 | Not Available | Positive | 3246673 - 3247689 | 37328.5 |
| phosphonates transport system, permease protein | SAMEA3485113_03148 | Not Available | Positive | 3247795 - 3248574 | 28385.3 |
| phosphonate metabolism transcriptional regulator phnf | SAMEA3485113_03149 | Not Available | Positive | 3248595 - 3249320 | 27623.1 |
| phosphonate metabolism protein | SAMEA3485113_03150 | Not Available | Positive | 3249321 - 3249773 | 16597.8 |
| phosphonate metabolism protein | SAMEA3485113_03151 | Not Available | Positive | 3249770 - 3250354 | 20970.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





