Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative oligopeptide transporter | SAMEA3485113_03121 | Not Available | Positive | 3215109 - 3216566 | 53008.7 |
| lysyl-trna synthetase | SAMEA3485113_03122 | Not Available | Positive | 3216803 - 3218320 | 57858.0 |
| putative inner membrane protein | SAMEA3485113_03123 | Not Available | Negative | 3218439 - 3218612 | 6555.44 |
| protein | SAMEA3485113_03124 | Not Available | Negative | 3218640 - 3218936 | 11468.6 |
| acyltransferase with acyl-coa n-acyltransferase domain | SAMEA3485113_03125 | Not Available | Negative | 3219165 - 3219437 | 10469.6 |
| uncharacterized conserved protein | SAMEA3485113_03126 | Not Available | Negative | 3219449 - 3219679 | 8647.42 |
| two-component sensor kinase | SAMEA3485113_03127 | Not Available | Positive | 3219859 - 3221490 | 60554.4 |
| two-component response regulator | SAMEA3485113_03128 | Not Available | Positive | 3221487 - 3222206 | 27489.9 |
| anaerobic c4-dicarboxylate transporter dcub | SAMEA3485113_03129 | Not Available | Positive | 3222777 - 3224117 | 47938.2 |
| tartrate/fumarate subfamily fe-s type hydro-lyase subunit beta | SAMEA3485113_03130 | Not Available | Positive | 3224195 - 3225841 | 60104.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





