Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter | SAMEA3485113_03101 | Not Available | Positive | 3197660 - 3199033 | 48154.7 |
| uncharacterised protein | SAMEA3485113_03102 | Not Available | Negative | 3199275 - 3199469 | 7463.95 |
| putative atp/gtp-binding protein | SAMEA3485113_03103 | Not Available | Positive | 3199575 - 3200459 | 33279.1 |
| uncharacterised protein | SAMEA3485113_03104 | Not Available | Negative | 3200388 - 3200564 | 6693.11 |
| putative dna-binding protein | SAMEA3485113_03105 | Not Available | Positive | 3200662 - 3201342 | 26109.8 |
| uncharacterised protein | SAMEA3485113_03106 | Not Available | Positive | 3201490 - 3202167 | 24359.0 |
| cp4-6 prophage protein | SAMEA3485113_03107 | Not Available | Positive | 3202173 - 3202406 | 8816.4 |
| cp4-57 prophage protein | SAMEA3485113_03108 | Not Available | Positive | 3202496 - 3203314 | 31193.4 |
| anti-restriction protein | SAMEA3485113_03109 | Not Available | Positive | 3203405 - 3203890 | 18307.6 |
| putative dna repair protein | SAMEA3485113_03110 | Not Available | Positive | 3203905 - 3204381 | 17662.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





