Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytoplasmic protein | SAMEA3485113_03090 | Not Available | Negative | 3188957 - 3189166 | 8073.75 |
| mannose-specific pts system eiiab component | SAMEA3485113_03091 | Not Available | Positive | 3189432 - 3190403 | 35049.6 |
| mannose-specific pts system transporter subunit iic | SAMEA3485113_03092 | Not Available | Positive | 3190466 - 3191266 | 27637.6 |
| mannose-specific pts system eiid component | SAMEA3485113_03093 | Not Available | Positive | 3191279 - 3192130 | 30957.4 |
| inner membrane protein | SAMEA3485113_03094 | Not Available | Positive | 3192185 - 3192643 | 17632.4 |
| inner membrane protein | SAMEA3485113_03095 | Not Available | Positive | 3193072 - 3193638 | 20132.3 |
| ribosomal rna large subunit methyltransferase a | SAMEA3485113_03096 | Not Available | Negative | 3193635 - 3194444 | 30478.6 |
| protein | SAMEA3485113_03098 | Not Available | Negative | 3195645 - 3195932 | 10827.1 |
| protein | SAMEA3485113_03099 | Not Available | Positive | 3196309 - 3196548 | 8514.67 |
| iclr-family transcriptional regulator | SAMEA3485113_03100 | Not Available | Negative | 3196692 - 3197483 | 30031.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





