Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protease yeaz | SAMEA3485113_03080 | Not Available | Negative | 3177956 - 3178651 | 25122.2 |
| putative atp-binding protein | SAMEA3485113_03081 | Not Available | Negative | 3178709 - 3180619 | 70365.9 |
| putative translation initiation inhibitor | SAMEA3485113_03082 | Not Available | Positive | 3180748 - 3181095 | 12625.1 |
| protein | SAMEA3485113_03083 | Not Available | Positive | 3181517 - 3181816 | 10821.9 |
| uncharacterized protein conserved in bacteria | SAMEA3485113_03084 | Not Available | Negative | 3181936 - 3182115 | 6554.7 |
| para-aminobenzoate synthase component i | SAMEA3485113_03085 | Not Available | Positive | 3182189 - 3183550 | 50980.3 |
| nudix-family hydrolase | SAMEA3485113_03086 | Not Available | Positive | 3183554 - 3184132 | 21464.9 |
| l-serine deaminase 1 | SAMEA3485113_03087 | Not Available | Positive | 3184316 - 3185680 | 48909.5 |
| putative signal transduction protein | SAMEA3485113_03088 | Not Available | Positive | 3185811 - 3187409 | 59706.0 |
| membrane protein | SAMEA3485113_03089 | Not Available | Negative | 3187413 - 3188969 | 56559.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





