Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| major facilitator superfamily protein | SAMEA3485113_03049 | Not Available | Negative | 3146016 - 3147395 | 49691.0 |
| zinc-type alcohol dehydrogenase-like protein ydjl | SAMEA3485113_03050 | Not Available | Negative | 3147422 - 3148498 | 38731.8 |
| putative cytoplasmic protein | SAMEA3485113_03051 | Not Available | Negative | 3148867 - 3149139 | 10273.4 |
| methionine sulfoxide reductase b | SAMEA3485113_03052 | Not Available | Negative | 3149181 - 3149594 | 15422.0 |
| glyceraldehyde 3-phosphate dehydrogenase a | SAMEA3485113_03053 | Not Available | Positive | 3149936 - 3150931 | 35534.5 |
| putative aldose 1-epimerase | SAMEA3485113_03054 | Not Available | Positive | 3151015 - 3151899 | 32657.8 |
| putative aldo/keto reductase | SAMEA3485113_03055 | Not Available | Negative | 3151950 - 3152804 | 31002.5 |
| mlta-interacting protein | SAMEA3485113_03056 | Not Available | Negative | 3152894 - 3153640 | 27832.4 |
| serine kinase family protein | SAMEA3485113_03057 | Not Available | Positive | 3154076 - 3156010 | 74484.3 |
| putative cytoplasmic protein | SAMEA3485113_03058 | Not Available | Positive | 3156123 - 3157406 | 49452.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





