Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative nitroreductase | SAMEA3485113_03039 | Not Available | Negative | 3135291 - 3135842 | 20074.2 |
| signal peptide peptidase sppa, 67k type | SAMEA3485113_03040 | Not Available | Positive | 3136003 - 3137859 | 67263.0 |
| l-asparaginase i | SAMEA3485113_03041 | Not Available | Positive | 3138025 - 3139041 | 37157.5 |
| nicotinamidase/pyrazinamidase | SAMEA3485113_03042 | Not Available | Positive | 3139052 - 3139693 | 23440.4 |
| metabolite transport protein | SAMEA3485113_03043 | Not Available | Negative | 3139786 - 3141144 | 50149.6 |
| deor-family transcriptional regulator | SAMEA3485113_03044 | Not Available | Negative | 3141262 - 3142020 | 28252.0 |
| putative sugar reductase | SAMEA3485113_03045 | Not Available | Negative | 3142157 - 3143137 | 36317.9 |
| sugar kinase | SAMEA3485113_03046 | Not Available | Negative | 3143147 - 3144094 | 34093.2 |
| putative sugar-bisphosphate aldolase | SAMEA3485113_03047 | Not Available | Negative | 3144201 - 3144935 | 26892.8 |
| putative zinc-binding dehydrogenase | SAMEA3485113_03048 | Not Available | Negative | 3144956 - 3145999 | 37691.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





