Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amp nucleosidase | SAMEA3485113_02999 | Not Available | Negative | 3092652 - 3094106 | 54011.9 |
| shikimate transporter | SAMEA3485113_03000 | Not Available | Negative | 3094208 - 3095524 | 47798.2 |
| adp-heptose--lps heptosyltransferase-like protein | SAMEA3485113_03001 | Not Available | Positive | 3095839 - 3096891 | 39346.2 |
| putative invasin | SAMEA3485113_03002 | Not Available | Negative | 3097471 - 3106113 | 302304.0 |
| Trna-asn | Not Available | Not Available | Positive | 3106399 - 3106474 | Not Available |
| dgsa anti-repressor mtfa | SAMEA3485113_03004 | Not Available | Negative | 3106575 - 3107372 | 30280.8 |
| Trna-ser | Not Available | Not Available | Positive | 3107466 - 3107555 | Not Available |
| tere | SAMEA3485113_03036 | Not Available | Positive | 3131011 - 3131586 | 20480.9 |
| dna topoisomerase iii | SAMEA3485113_03037 | Not Available | Negative | 3132171 - 3134126 | 73225.9 |
| selenophosphate synthetase | SAMEA3485113_03038 | Not Available | Negative | 3134131 - 3135174 | 36689.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





