Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative outer membrane protein | SAMEA3485113_02957 | Not Available | Negative | 3059133 - 3059792 | 22198.6 |
| biotin sulfoxide reductase | SAMEA3485113_02958 | Not Available | Positive | 3059945 - 3062278 | 86045.5 |
| putative acetyltransferase | SAMEA3485113_02959 | Not Available | Negative | 3062247 - 3062687 | 17114.7 |
| dna-3-methyladenine glycosylase i | SAMEA3485113_02960 | Not Available | Negative | 3062684 - 3063247 | 21067.1 |
| lipase | SAMEA3485113_02961 | Not Available | Positive | 3063405 - 3064022 | 23015.8 |
| inner membrane protein yeea | SAMEA3485113_02962 | Not Available | Positive | 3064357 - 3064779 | 16200.9 |
| putative alpha helix protein | SAMEA3485113_02963 | Not Available | Positive | 3064951 - 3065280 | 12778.5 |
| propanediol utilization protein pduv | SAMEA3485113_02964 | Not Available | Negative | 3065381 - 3065824 | 16142.5 |
| putative propanediol utilization polyhedral bodies pduu | SAMEA3485113_02965 | Not Available | Negative | 3065829 - 3066179 | 12414.2 |
| propanediol utilization protein pdut | SAMEA3485113_02966 | Not Available | Negative | 3066179 - 3066733 | 19131.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





