Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i and ii aminotransferase | SAMEA3485113_02935 | Not Available | Negative | 3035024 - 3036277 | 46715.9 |
| alpha-amylase | SAMEA3485113_02936 | Not Available | Negative | 3036455 - 3038485 | 75839.6 |
| putative endo-beta-n-acetylglucosaminidase | SAMEA3485113_02937 | Not Available | Positive | 3038805 - 3039629 | 30869.3 |
| dna-binding transcriptional activator | SAMEA3485113_02938 | Not Available | Negative | 3039737 - 3040915 | 44848.6 |
| xylose transport system permease xylh | SAMEA3485113_02939 | Not Available | Negative | 3040993 - 3042174 | 41033.5 |
| d-xylose transport atp-binding protein xylg | SAMEA3485113_02940 | Not Available | Negative | 3042152 - 3043693 | 56443.9 |
| d-xylose transporter subunit xylf | SAMEA3485113_02941 | Not Available | Negative | 3043771 - 3044763 | 35736.1 |
| d-xylose isomerase | SAMEA3485113_02942 | Not Available | Positive | 3045129 - 3046451 | 49702.6 |
| xylulose kinase | SAMEA3485113_02943 | Not Available | Positive | 3046523 - 3047977 | 52642.2 |
| inner membrane protein | SAMEA3485113_02944 | Not Available | Positive | 3048145 - 3048486 | 12561.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





