Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Aaa+ atpase | SAMEA3485113_04647 | Not Available | Positive | 4718408 - 4719490 | 40157.7 |
| Hypothetical protein | SAMEA3485113_04648 | Not Available | Positive | 4719490 - 4721691 | 81587.8 |
| Pbsx family portal protein | SAMEA3485113_04649 | Not Available | Negative | 4722145 - 4723194 | 39154.7 |
| Hypothetical protein | SAMEA3485113_04650 | Not Available | Negative | 4723194 - 4724936 | 65323.4 |
| Capsid scaffolding protein | SAMEA3485113_04651 | Not Available | Positive | 4725088 - 4725957 | 31643.1 |
| Major capsid protein, p2 family | SAMEA3485113_04652 | Not Available | Positive | 4725967 - 4727028 | 39059.4 |
| Terminase endonuclease subunit | SAMEA3485113_04653 | Not Available | Positive | 4727078 - 4727890 | 29268.0 |
| Head completion/stabilization protein | SAMEA3485113_04654 | Not Available | Positive | 4728013 - 4728507 | 18248.5 |
| Tail protein x | SAMEA3485113_04655 | Not Available | Positive | 4728507 - 4728707 | 7449.86 |
| Tail protein | SAMEA3485113_04656 | Not Available | Positive | 4728698 - 4728991 | 10685.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





