Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | SAMEA3485113_02915 | Not Available | Negative | 3016046 - 3016258 | 7969.11 |
| inner membrane protein | SAMEA3485113_02916 | Not Available | Positive | 3016372 - 3016695 | 12390.2 |
| hlyd-family secretion protein | SAMEA3485113_02917 | Not Available | Positive | 3016701 - 3017837 | 41742.6 |
| lysr family transcriptional regulator | SAMEA3485113_02918 | Not Available | Negative | 3017834 - 3018808 | 37374.6 |
| putative scaffolding protein | SAMEA3485113_02919 | Not Available | Positive | 3018932 - 3019672 | 27370.9 |
| ybl149 | SAMEA3485113_02920 | Not Available | Negative | 3019802 - 3021772 | 75050.0 |
| permease | SAMEA3485113_02921 | Not Available | Negative | 3021783 - 3023183 | 51481.0 |
| arac family transcriptional regulator | SAMEA3485113_02922 | Not Available | Positive | 3023409 - 3024224 | 31550.1 |
| l-ribulose-5-phosphate 4-epimerase | SAMEA3485113_02923 | Not Available | Negative | 3024256 - 3024951 | 25471.2 |
| l-xylulose 5-phosphate 3-epimerase | SAMEA3485113_02924 | Not Available | Negative | 3024945 - 3025805 | 32487.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





