Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannitol-1-phosphate 5-dehydrogenase | SAMEA3485113_02905 | Not Available | Negative | 3003848 - 3004996 | 41154.5 |
| pts system subunit iiabc | SAMEA3485113_02906 | Not Available | Negative | 3005225 - 3007138 | 68004.5 |
| inner membrane protein | SAMEA3485113_02907 | Not Available | Positive | 3007675 - 3008037 | 13866.8 |
| hlyd-family secretion protein | SAMEA3485113_02908 | Not Available | Positive | 3008040 - 3009176 | 41990.8 |
| putative glutathione s-transferase | SAMEA3485113_02909 | Not Available | Positive | 3009247 - 3009855 | 22546.3 |
| l-seryl-trna(ser) selenium transferase | SAMEA3485113_02910 | Not Available | Positive | 3009953 - 3011344 | 50742.4 |
| selenocysteinyl-trna-specific translation factor | SAMEA3485113_02911 | Not Available | Positive | 3011341 - 3013185 | 68895.5 |
| putative alcohol dehydrogenase | SAMEA3485113_02912 | Not Available | Positive | 3013375 - 3013566 | 7059.45 |
| putative alcohol dehydrogenase | SAMEA3485113_02913 | Not Available | Positive | 3013505 - 3014080 | 20099.2 |
| lactaldehyde dehydrogenase | SAMEA3485113_02914 | Not Available | Positive | 3014281 - 3015819 | 56369.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





