Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted o-linked n-acetylglucosamine transferase, spindly family | SAMEA3485113_02875 | Not Available | Positive | 2970423 - 2971460 | 39366.1 |
| kpss protein | SAMEA3485113_02876 | Not Available | Negative | 2971551 - 2972801 | 49673.1 |
| polysialic acid capsule polysaccharide export protein kpsc | SAMEA3485113_02877 | Not Available | Negative | 2972836 - 2974863 | 75541.2 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | SAMEA3485113_02878 | Not Available | Negative | 2974860 - 2975600 | 27252.8 |
| polysialic acid transport protein | SAMEA3485113_02879 | Not Available | Negative | 2975610 - 2977286 | 60402.4 |
| capsule polysaccharide export inner-membrane protein | SAMEA3485113_02880 | Not Available | Negative | 2977310 - 2978458 | 43077.0 |
| polysialic acid capsule synthesis protein kpsf | SAMEA3485113_02881 | Not Available | Negative | 2978530 - 2979513 | 35535.0 |
| ybl126 | SAMEA3485113_02882 | Not Available | Positive | 2980308 - 2980598 | 11105.8 |
| putative restriction methylase | SAMEA3485113_02883 | Not Available | Negative | 2980836 - 2981678 | 32466.3 |
| aec77 | SAMEA3485113_02884 | Not Available | Negative | 2981771 - 2982115 | 12671.5 |
Pathways
1249 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





