Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| general secretion pathway protein g precursor (epsg-like) | SAMEA3485113_02864 | Not Available | Positive | 2959208 - 2959663 | 16662.8 |
| type ii secretion system protein h | SAMEA3485113_02865 | Not Available | Positive | 2959667 - 2960230 | 21212.8 |
| type ii secretion system protein i | SAMEA3485113_02866 | Not Available | Positive | 2960227 - 2960598 | 13666.4 |
| type ii secretion protein gspj | SAMEA3485113_02867 | Not Available | Positive | 2960595 - 2961200 | 22429.4 |
| type ii secretion system protein k | SAMEA3485113_02868 | Not Available | Positive | 2961197 - 2962174 | 36500.3 |
| type ii secretion system protein l | SAMEA3485113_02869 | Not Available | Positive | 2962171 - 2963349 | 44238.3 |
| general secretion pathway protein yghd | SAMEA3485113_02870 | Not Available | Positive | 2963351 - 2963887 | 20385.7 |
| polysialic acid transport protein | SAMEA3485113_02872 | Not Available | Positive | 2965038 - 2965814 | 29507.3 |
| capsular polysaccharide abc transporter,atp-binding protein | SAMEA3485113_02873 | Not Available | Positive | 2965811 - 2966473 | 24978.0 |
| putative hydrolase | SAMEA3485113_02874 | Not Available | Positive | 2966700 - 2970113 | 131502.0 |
Pathways
903 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





