Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Membrane protein | SAMEA3485113_04635 | Not Available | Positive | 4711325 - 4711438 | 4231.41 |
| Hypothetical protein | SAMEA3485113_04636 | Not Available | Positive | 4711525 - 4711728 | 7986.54 |
| Marr family transcriptional regulator | SAMEA3485113_04637 | Not Available | Positive | 4711725 - 4711964 | 8864.69 |
| Hypothetical protein | SAMEA3485113_04638 | Not Available | Positive | 4711961 - 4712260 | 11272.7 |
| hth domain | SAMEA3485113_04639 | Not Available | Positive | 4712275 - 4712826 | 21214.8 |
| Derepression protein | SAMEA3485113_04642 | Not Available | Positive | 4713150 - 4713380 | 8856.66 |
| uncharacterised protein | SAMEA3485113_04643 | Not Available | Positive | 4713453 - 4713842 | 14614.0 |
| Replication protein | SAMEA3485113_04644 | Not Available | Positive | 4713839 - 4716679 | 108363.0 |
| Recombinase | SAMEA3485113_04645 | Not Available | Positive | 4716756 - 4717715 | 35015.6 |
| Chromosome partitioning protein | SAMEA3485113_04646 | Not Available | Positive | 4717718 - 4718029 | 11342.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





