Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional activator rhar | SAMEA3485113_02751 | Not Available | Negative | 2822053 - 2822991 | 35610.3 |
| l-rhamnose operon regulatory protein | SAMEA3485113_02752 | Not Available | Negative | 2822975 - 2823811 | 32413.2 |
| rhamnulokinase | SAMEA3485113_02753 | Not Available | Positive | 2824099 - 2825568 | 54049.0 |
| l-rhamnose isomerase | SAMEA3485113_02754 | Not Available | Positive | 2825565 - 2826824 | 47159.9 |
| rhamnulose-1-phosphate aldolase | SAMEA3485113_02755 | Not Available | Positive | 2826907 - 2827731 | 30099.1 |
| l-rhamnose mutarotase | SAMEA3485113_02756 | Not Available | Positive | 2827741 - 2828055 | 12235.4 |
| putative porin | SAMEA3485113_02757 | Not Available | Negative | 2828096 - 2829490 | 51992.4 |
| fructose-like phosphotransferase system subunit eiia | SAMEA3485113_02758 | Not Available | Positive | 2829967 - 2830413 | 16176.4 |
| pts system subunit iic | SAMEA3485113_02759 | Not Available | Positive | 2830424 - 2831875 | 51126.5 |
| fructose-specific phosphotransferase system protein frvx | SAMEA3485113_02760 | Not Available | Positive | 2831865 - 2832935 | 38781.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





