Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminomethyltransferase (glycine cleavage system protein) | SAMEA3485113_02639 | Not Available | Positive | 2696644 - 2697807 | 42899.4 |
| glycine cleavage system protein h | SAMEA3485113_02640 | Not Available | Positive | 2697831 - 2698220 | 13827.8 |
| glycine dehydrogenase | SAMEA3485113_02641 | Not Available | Positive | 2698339 - 2701212 | 104382.0 |
| 6-phospho-beta-glucosidase | SAMEA3485113_02642 | Not Available | Negative | 2701378 - 2702811 | 55110.2 |
| putative cytoplasmic protein | SAMEA3485113_02643 | Not Available | Positive | 2702856 - 2703167 | 11906.0 |
| hemolysin (membrane protein) | SAMEA3485113_02644 | Not Available | Positive | 2703331 - 2703990 | 23848.2 |
| pp_02512 | SAMEA3485113_02645 | Not Available | Negative | 2704185 - 2705165 | Not Available |
| tpr repeat protein | SAMEA3485113_02646 | Not Available | Positive | 2705408 - 2705674 | 10547.7 |
| protein | SAMEA3485113_02647 | Not Available | Positive | 2705655 - 2706062 | 16095.0 |
| flavodoxin ii | SAMEA3485113_02648 | Not Available | Negative | 2706102 - 2706623 | 19701.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





