Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate oxidase | SAMEA3485113_02565 | Not Available | Negative | 2619205 - 2620923 | 61984.9 |
| hcp oxidoreductase, nadh-dependent | SAMEA3485113_02566 | Not Available | Negative | 2621056 - 2622024 | 35713.8 |
| hydroxylamine reductase | SAMEA3485113_02567 | Not Available | Negative | 2622036 - 2623688 | 60150.4 |
| transporter | SAMEA3485113_02568 | Not Available | Negative | 2623832 - 2624731 | 32380.3 |
| aquaporin z | SAMEA3485113_02569 | Not Available | Negative | 2625215 - 2625910 | 23703.2 |
| nucleoside triphosphate hydrolase domain | SAMEA3485113_02570 | Not Available | Positive | 2626336 - 2627994 | 63560.9 |
| virulence protein | SAMEA3485113_02571 | Not Available | Negative | 2627991 - 2628983 | 38208.6 |
| macrolide-specific efflux protein | SAMEA3485113_02572 | Not Available | Positive | 2629098 - 2630213 | 40646.3 |
| abc transporter atp-binding protein/permease | SAMEA3485113_02595 | Not Available | Negative | 2649809 - 2651575 | 65069.0 |
| thioredoxin reductase | SAMEA3485113_02596 | Not Available | Negative | 2651698 - 2652663 | 34585.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





