Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine transport system permease | SAMEA3485113_02555 | Not Available | Negative | 2608906 - 2609622 | 26250.7 |
| arginine abc transporter, substrate-binding protein | SAMEA3485113_02556 | Not Available | Negative | 2609629 - 2610360 | 26961.0 |
| arginine transport system atp-binding protein | SAMEA3485113_02557 | Not Available | Negative | 2610378 - 2611106 | 27023.7 |
| lipoprotein | SAMEA3485113_02558 | Not Available | Negative | 2611324 - 2611839 | 18907.2 |
| putative type iii effector protein (pentapeptide repeat protein) | SAMEA3485113_02559 | Not Available | Positive | 2612454 - 2614256 | 69219.6 |
| conserved protein, upf0145 family | SAMEA3485113_02560 | Not Available | Positive | 2614467 - 2614790 | 11465.7 |
| putative n-acetylmuramoyl-l-alanine amidase | SAMEA3485113_02561 | Not Available | Positive | 2614787 - 2615617 | 31102.2 |
| nucleotide di-p-sugar epimerase or dehydratase | SAMEA3485113_02562 | Not Available | Negative | 2615614 - 2616627 | 38115.9 |
| nad(p)-binding rossmann-fold domain | SAMEA3485113_02563 | Not Available | Negative | 2616726 - 2618156 | 53770.2 |
| low specificity l-threonine aldolase | SAMEA3485113_02564 | Not Available | Negative | 2618167 - 2619168 | 36472.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





