Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein roda | SAMEA3485113_02483 | Not Available | Negative | 2543522 - 2544634 | 40478.6 |
| penicillin-binding protein 2 | SAMEA3485113_02484 | Not Available | Negative | 2544637 - 2546538 | 70890.6 |
| putative cytoplasmic protein ybea | SAMEA3485113_02485 | Not Available | Negative | 2546569 - 2547036 | 17342.1 |
| putative acr | SAMEA3485113_02486 | Not Available | Negative | 2547040 - 2547357 | 11582.9 |
| alpha-ribazole-5'-phosphate phosphatase | SAMEA3485113_02487 | Not Available | Negative | 2547617 - 2548228 | 23334.8 |
| nicotinic acid mononucleotide adenylyltransferase | SAMEA3485113_02488 | Not Available | Negative | 2548252 - 2548893 | 24529.3 |
| dna polymerase iii subunit delta | SAMEA3485113_02489 | Not Available | Negative | 2548895 - 2549926 | 38744.1 |
| rare lipoprotein b | SAMEA3485113_02490 | Not Available | Negative | 2549926 - 2550489 | 20613.9 |
| leucyl-trna synthetase | SAMEA3485113_02491 | Not Available | Negative | 2550504 - 2553086 | 97222.0 |
| putative alpha helical protein | SAMEA3485113_02492 | Not Available | Positive | 2553321 - 2553803 | 18798.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





