Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| subunit of palmitoyl transferase for lipid a | SAMEA3485113_02472 | Not Available | Positive | 2534872 - 2535432 | 21702.5 |
| protein crcb | SAMEA3485113_02474 | Not Available | Negative | 2535870 - 2536253 | 13637.0 |
| amidase | SAMEA3485113_02475 | Not Available | Positive | 2536349 - 2537137 | 28664.0 |
| sec-independent protein translocase protein | SAMEA3485113_02476 | Not Available | Positive | 2537266 - 2537469 | 7024.71 |
| lipoyl synthase lipa | SAMEA3485113_02477 | Not Available | Negative | 2537570 - 2538535 | 36073.8 |
| lysr family transcriptional regulator | SAMEA3485113_02478 | Not Available | Negative | 2538744 - 2539697 | 35867.4 |
| lipoate-protein ligase b | SAMEA3485113_02479 | Not Available | Negative | 2539957 - 2540598 | 23898.0 |
| protein ybed | SAMEA3485113_02480 | Not Available | Negative | 2540699 - 2540962 | 9827.92 |
| d-alanyl-d-alanine carboxypeptidase | SAMEA3485113_02481 | Not Available | Negative | 2541072 - 2542283 | 44446.5 |
| rare lipoprotein a | SAMEA3485113_02482 | Not Available | Negative | 2542423 - 2543511 | 37502.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





