Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine sulfoxide reductase a | SAMEA3485113_02390 | Not Available | Positive | 2454008 - 2454646 | 23335.3 |
| putative transporter | SAMEA3485113_02392 | Not Available | Positive | 2454969 - 2456312 | 49765.6 |
| conserved protein, duf1107 family | SAMEA3485113_02393 | Not Available | Negative | 2456374 - 2456580 | 8072.24 |
| protein ytfj | SAMEA3485113_02394 | Not Available | Positive | 2456905 - 2457459 | 20495.7 |
| uncharacterised protein | SAMEA3485113_02395 | Not Available | Negative | 2457548 - 2458459 | 34895.6 |
| cysq protein | SAMEA3485113_02396 | Not Available | Negative | 2458672 - 2459412 | 27191.4 |
| bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic protein | SAMEA3485113_02397 | Not Available | Positive | 2459602 - 2461545 | 70877.1 |
| putative transcriptional regulator ytfh | SAMEA3485113_02398 | Not Available | Negative | 2461663 - 2462043 | 14094.0 |
| nad(p)h:quinone oxidoreductase | SAMEA3485113_02399 | Not Available | Positive | 2462132 - 2462992 | 29727.2 |
| membrane protein ytff | SAMEA3485113_02400 | Not Available | Positive | 2463101 - 2464066 | 35192.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





