Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative two-component response regulator | SAMEA3485113_02339 | Not Available | Negative | 2396113 - 2396745 | 23399.6 |
| putative oxygen-regulated invasion protein | SAMEA3485113_02340 | Not Available | Negative | 2396968 - 2397675 | 27250.7 |
| putative oxygen-regulated invasion protein | SAMEA3485113_02341 | Not Available | Negative | 2397617 - 2398198 | 22789.9 |
| type iii secretion system protein | SAMEA3485113_02342 | Not Available | Negative | 2398214 - 2398693 | 18074.1 |
| inner membrane protein yeea | SAMEA3485113_02343 | Not Available | Negative | 2398877 - 2399290 | 15670.8 |
| superfamily i dna helicase | SAMEA3485113_02344 | Not Available | Negative | 2399353 - 2402868 | 131566.0 |
| ribonuclease h | SAMEA3485113_02345 | Not Available | Negative | 2403194 - 2403571 | 13868.0 |
| uncharacterised protein | SAMEA3485113_02346 | Not Available | Negative | 2403640 - 2404419 | 29355.7 |
| putative prophage p4 integrase | SAMEA3485113_02347 | Not Available | Negative | 2404520 - 2404633 | 4155.01 |
| Trna-leu | Not Available | Not Available | Positive | 2404820 - 2404904 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





