Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | SAMEA3485113_02319 | Not Available | Positive | 2380433 - 2381368 | 34410.7 |
| putative asp/glu/hydantoin racemase | SAMEA3485113_02320 | Not Available | Negative | 2381355 - 2382047 | 25406.7 |
| arabinose-proton symporter | SAMEA3485113_02321 | Not Available | Negative | 2382176 - 2383594 | 51697.7 |
| 2-keto-3-deoxygluconate oxidoreductase | SAMEA3485113_02322 | Not Available | Negative | 2383909 - 2384670 | 27042.7 |
| 5-keto-4-deoxyuronate isomerase | SAMEA3485113_02323 | Not Available | Negative | 2384700 - 2385002 | 11589.8 |
| uncharacterised protein | SAMEA3485113_02324 | Not Available | Positive | 2385135 - 2385305 | 6107.35 |
| 5-keto-4-deoxyuronate isomerase | SAMEA3485113_02325 | Not Available | Negative | 2385231 - 2385536 | 11080.4 |
| putative acyltransferase | SAMEA3485113_02326 | Not Available | Negative | 2385823 - 2387004 | 40997.1 |
| membrane protein | SAMEA3485113_02327 | Not Available | Positive | 2387259 - 2388488 | 45116.0 |
| bipartite regulator domain | SAMEA3485113_02328 | Not Available | Positive | 2388948 - 2389580 | 24387.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





