Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-fuculose phosphate aldolase | SAMEA3485113_02276 | Not Available | Negative | 2334614 - 2335261 | 23845.8 |
| l-fucose permease | SAMEA3485113_02277 | Not Available | Positive | 2335808 - 2337124 | 47547.6 |
| l-fucose isomerase | SAMEA3485113_02278 | Not Available | Positive | 2337157 - 2338932 | 64980.3 |
| l-fuculokinase | SAMEA3485113_02279 | Not Available | Positive | 2339041 - 2340459 | 52287.7 |
| putative fuscose transport/metabolism protein | SAMEA3485113_02280 | Not Available | Positive | 2340461 - 2340883 | 15474.0 |
| fucr family transcriptional regulator | SAMEA3485113_02281 | Not Available | Positive | 2340941 - 2341672 | 27363.7 |
| putative rna 2'-o-ribose methyltransferase | SAMEA3485113_02282 | Not Available | Negative | 2341716 - 2342816 | 41907.5 |
| inner membrane protein ygdd | SAMEA3485113_02283 | Not Available | Negative | 2342809 - 2343204 | 14334.0 |
| putative transcriptional regulator of glycine cleavage system | SAMEA3485113_02284 | Not Available | Negative | 2343223 - 2344140 | 34403.4 |
| putative lipoprotein | SAMEA3485113_02286 | Not Available | Negative | 2344491 - 2344718 | 8174.67 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





