Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative flavodoxin | SAMEA3485113_02265 | Not Available | Negative | 2324060 - 2324509 | 16298.1 |
| trna pseudouridine synthase c | SAMEA3485113_02266 | Not Available | Negative | 2324713 - 2325309 | 22876.5 |
| domain of uncharacterised function, duf446 | SAMEA3485113_02267 | Not Available | Negative | 2325309 - 2325638 | 12787.2 |
| putative secy-interacting protein | SAMEA3485113_02269 | Not Available | Negative | 2326260 - 2326805 | 20709.6 |
| nadph-dependent 7-cyano-7-deazaguanine reductase | SAMEA3485113_02270 | Not Available | Positive | 2326873 - 2327721 | 32531.1 |
| putative decarboxylase | SAMEA3485113_02271 | Not Available | Positive | 2327833 - 2329197 | 50975.0 |
| serine transporter | SAMEA3485113_02272 | Not Available | Positive | 2329753 - 2331042 | 46909.2 |
| l-serine dehydratase 2 | SAMEA3485113_02273 | Not Available | Positive | 2331100 - 2332467 | 48725.8 |
| 5'-3' exonuclease | SAMEA3485113_02274 | Not Available | Positive | 2332488 - 2333333 | 31495.9 |
| lactaldehyde reductase (propanediol oxidoreductase) | SAMEA3485113_02275 | Not Available | Negative | 2333438 - 2334586 | 40573.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





