Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr-family transcriptional regulator (h-ns-dependent flhd regulator) | SAMEA3485113_02164 | Not Available | Positive | 2213589 - 2214428 | 31717.9 |
| Trna-trp | Not Available | Not Available | Positive | 2214523 - 2214598 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 2214607 - 2214683 | Not Available |
| translation elongation factor g | SAMEA3485113_02167 | Not Available | Negative | 2215137 - 2217251 | 77625.8 |
| 30s ribosomal protein s7 | SAMEA3485113_02168 | Not Available | Negative | 2217348 - 2217818 | 17605.4 |
| 30s ribosomal protein s12 | SAMEA3485113_02169 | Not Available | Negative | 2217915 - 2218289 | 13737.9 |
| trna 2-thiouridine synthesizing protein b | SAMEA3485113_02170 | Not Available | Negative | 2218415 - 2218702 | 10708.9 |
| trna 2-thiouridine synthesizing protein c | SAMEA3485113_02171 | Not Available | Negative | 2218710 - 2219069 | 13045.7 |
| trna 2-thiouridine synthesizin protein d (sulfurtransferase) | SAMEA3485113_02172 | Not Available | Negative | 2219069 - 2219455 | 13615.0 |
| putative dna-binding transcriptional regulator | SAMEA3485113_02173 | Not Available | Negative | 2219455 - 2220177 | 26822.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





