Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porphobilinogen deaminase | SAMEA3485113_02122 | Not Available | Positive | 2170368 - 2171330 | 34632.0 |
| uroporphyrinogen iii synthase | SAMEA3485113_02123 | Not Available | Positive | 2171327 - 2172067 | 27882.6 |
| putative uroporphyrinogen iii c-methyltransferase | SAMEA3485113_02124 | Not Available | Positive | 2172089 - 2173288 | 43484.9 |
| porphyrin biosynthetic protein | SAMEA3485113_02125 | Not Available | Positive | 2173291 - 2174487 | 45277.8 |
| arylsulfatase | SAMEA3485113_02128 | Not Available | Positive | 2175757 - 2177412 | 60692.9 |
| arylsulfatase | SAMEA3485113_02129 | Not Available | Negative | 2177503 - 2178738 | 46395.6 |
| Trna-pro | Not Available | Not Available | Positive | 2178885 - 2178961 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 2179004 - 2179090 | Not Available |
| Trna-his | Not Available | Not Available | Positive | 2179111 - 2179186 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 2179245 - 2179321 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





