Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acref/envcd operon repressor (tetr-family transcriptional regulator) | SAMEA3485113_02060 | Not Available | Negative | 2106457 - 2107119 | 25200.7 |
| acriflavine resistance protein e | SAMEA3485113_02061 | Not Available | Positive | 2107518 - 2108675 | 41241.0 |
| multidrug efflux system protein | SAMEA3485113_02062 | Not Available | Positive | 2108687 - 2111791 | 111466.0 |
| uncharacterised protein | SAMEA3485113_02063 | Not Available | Negative | 2111648 - 2111938 | 11106.0 |
| lipoprotein | SAMEA3485113_02064 | Not Available | Positive | 2112044 - 2112265 | 7452.14 |
| putative abc transporter, substrate-binding protein | SAMEA3485113_02065 | Not Available | Positive | 2112696 - 2113721 | 37020.8 |
| abc transporter permease | SAMEA3485113_02066 | Not Available | Positive | 2113789 - 2114970 | 43220.8 |
| abc transporter permease | SAMEA3485113_02067 | Not Available | Positive | 2114980 - 2116083 | 41393.7 |
| abc transporter atp-binding protein | SAMEA3485113_02068 | Not Available | Positive | 2116091 - 2116849 | 28536.9 |
| Trna-thr | Not Available | Not Available | Positive | 2117068 - 2117143 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





