Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxybenzoate decarboxylase subunit d | SAMEA3485113_01888 | Not Available | Positive | 1943807 - 1943911 | 3989.88 |
| serine/threonine-specific protein phosphatase 2 | SAMEA3485113_01889 | Not Available | Negative | 1944085 - 1944753 | 25534.5 |
| putative lipoyl-binding dihydrolipamide acyltransferase | SAMEA3485113_01890 | Not Available | Negative | 1944766 - 1945629 | 32351.4 |
| dna mismatch repair protein muts | SAMEA3485113_01891 | Not Available | Negative | 1945734 - 1948295 | 95267.5 |
| uncharacterised protein | SAMEA3485113_01892 | Not Available | Positive | 1948371 - 1948505 | 4890.38 |
| protein | SAMEA3485113_01893 | Not Available | Positive | 1948582 - 1948926 | 13579.8 |
| molybdenum-pterin-binding-protein | SAMEA3485113_01894 | Not Available | Negative | 1948965 - 1949393 | 14508.6 |
| formate hydrogenlyase transcriptional activator | SAMEA3485113_01895 | Not Available | Negative | 1949438 - 1951516 | 78415.4 |
| hydrogenase isoenzymes formation protein | SAMEA3485113_01896 | Not Available | Negative | 1951590 - 1952600 | 35066.5 |
| hydrogenase isoenzymes formation protein | SAMEA3485113_01897 | Not Available | Negative | 1952597 - 1953718 | 41382.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





