Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamyl-trna synthetase | SAMEA3485113_01858 | Not Available | Positive | 1915415 - 1916830 | 53774.6 |
| putative regulatory protein | SAMEA3485113_01859 | Not Available | Negative | 1916881 - 1917252 | 14005.7 |
| putative dna-binding transcriptional regulator | SAMEA3485113_01860 | Not Available | Negative | 1917275 - 1917634 | 13412.3 |
| Trna-ala | Not Available | Not Available | Positive | 1917855 - 1917930 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 1917970 - 1918045 | Not Available |
| putative diguanylate cyclase | SAMEA3485113_01863 | Not Available | Positive | 1918253 - 1920442 | 83573.2 |
| crispr-associated helicase cas3 | SAMEA3485113_01864 | Not Available | Positive | 1920846 - 1923545 | 101842.0 |
| crispr-associated protein | SAMEA3485113_01865 | Not Available | Positive | 1923643 - 1925205 | 59169.5 |
| crispr-associated protein cse2 | SAMEA3485113_01866 | Not Available | Positive | 1925202 - 1925738 | 20687.6 |
| crispr-associated protein | SAMEA3485113_01867 | Not Available | Positive | 1925753 - 1926808 | 38404.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





