Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimf protein | SAMEA3485113_01744 | Not Available | Negative | 1799221 - 1799751 | 18700.3 |
| outer membrane usher protein fimd | SAMEA3485113_01745 | Not Available | Negative | 1799761 - 1802397 | 96549.8 |
| type i fimbrial chaperone | SAMEA3485113_01746 | Not Available | Negative | 1802464 - 1803189 | 26660.5 |
| type-1 fimbrial protein fimi | SAMEA3485113_01747 | Not Available | Negative | 1803226 - 1803723 | 17692.1 |
| fimbrial protein | SAMEA3485113_01748 | Not Available | Negative | 1803830 - 1804378 | 18150.3 |
| type 1 fimbriae major subunit fima | SAMEA3485113_01749 | Not Available | Negative | 1804852 - 1805400 | 18613.5 |
| tyrosine recombinase | SAMEA3485113_01750 | Not Available | Negative | 1805881 - 1806477 | 23117.6 |
| tyrosine recombinase | SAMEA3485113_01751 | Not Available | Negative | 1806955 - 1807557 | 22994.8 |
| uncharacterised protein | SAMEA3485113_01752 | Not Available | Positive | 1807817 - 1808212 | 14804.1 |
| n-acetylneuraminic acid outer membrane porin | SAMEA3485113_01753 | Not Available | Positive | 1809009 - 1809725 | 27889.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





