Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxypyruvate isomerase | SAMEA3485113_01600 | Not Available | Positive | 1655722 - 1656498 | 29396.1 |
| 2-hydroxy-3-oxopropionate reductase | SAMEA3485113_01601 | Not Available | Positive | 1656598 - 1657476 | 30802.5 |
| putative allantoin permease | SAMEA3485113_01602 | Not Available | Positive | 1657645 - 1659099 | 52391.1 |
| allantoinase | SAMEA3485113_01603 | Not Available | Positive | 1659160 - 1660521 | 49519.3 |
| putative permease | SAMEA3485113_01604 | Not Available | Positive | 1660578 - 1661879 | 47311.4 |
| glycerate kinase ii | SAMEA3485113_01605 | Not Available | Positive | 1661901 - 1663046 | 38844.1 |
| putative glyoxylate utilization | SAMEA3485113_01607 | Not Available | Negative | 1663176 - 1663961 | 28692.0 |
| allantoate amidohydrolase | SAMEA3485113_01608 | Not Available | Negative | 1663972 - 1665207 | 45671.6 |
| ureidoglycolate dehydrogenase | SAMEA3485113_01609 | Not Available | Negative | 1665229 - 1666278 | 37902.3 |
| fdra protein | SAMEA3485113_01610 | Not Available | Positive | 1666595 - 1668262 | 58511.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





