Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphotransferase system enzyme subunit | SAMEA3485113_01539 | Not Available | Negative | 1580706 - 1581179 | 17601.5 |
| gntr family transcriptional regulator | SAMEA3485113_01540 | Not Available | Negative | 1581204 - 1581950 | 28535.5 |
| nickel responsive regulator | SAMEA3485113_01541 | Not Available | Negative | 1582149 - 1582550 | 15094.7 |
| nickel abc transporter, atp-binding protein | SAMEA3485113_01542 | Not Available | Negative | 1582555 - 1583361 | 29728.4 |
| nickel abc transporter, atp-binding protein | SAMEA3485113_01543 | Not Available | Negative | 1583358 - 1584122 | 26814.1 |
| nickel abc transporter, permease protein | SAMEA3485113_01544 | Not Available | Negative | 1584122 - 1584955 | 30363.8 |
| nickel abc-transporter, permease protein | SAMEA3485113_01545 | Not Available | Negative | 1584952 - 1585896 | 35250.3 |
| nickel abc transporter, substrate-binding protein | SAMEA3485113_01546 | Not Available | Negative | 1585896 - 1587470 | 58811.2 |
| 4'-phosphopantetheinyl transferase | SAMEA3485113_01547 | Not Available | Negative | 1587581 - 1588168 | 21724.8 |
| putative beta-ketoacyl synthase | SAMEA3485113_01548 | Not Available | Negative | 1588170 - 1589399 | 44109.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





