Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative protease | SAMEA3485113_01478 | Not Available | Positive | 1510903 - 1512399 | 55547.5 |
| ketodeoxygluconokinase | SAMEA3485113_01479 | Not Available | Negative | 1512495 - 1513424 | 34021.2 |
| diguanylate phosphodiesterase | SAMEA3485113_01480 | Not Available | Positive | 1513656 - 1514423 | 29647.0 |
| putative outer membrane assembly protein | SAMEA3485113_01481 | Not Available | Positive | 1514493 - 1516553 | 74430.7 |
| major facilitator superfamily protein | SAMEA3485113_01482 | Not Available | Negative | 1516735 - 1518057 | 47210.9 |
| pp_01416 | SAMEA3485113_01483 | Not Available | Negative | 1518449 - 1519462 | Not Available |
| lysr family transcriptional regulator | SAMEA3485113_01484 | Not Available | Negative | 1519511 - 1520482 | 36118.0 |
| transcriptional regulator | SAMEA3485113_01485 | Not Available | Positive | 1520931 - 1521533 | 22605.6 |
| cytoplasmic trehalase | SAMEA3485113_01486 | Not Available | Negative | 1521584 - 1523233 | 63700.1 |
| putative cytochrome c peroxidase | SAMEA3485113_01487 | Not Available | Positive | 1523638 - 1525035 | 51555.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





