Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein yedr | SAMEA3485113_01443 | Not Available | Negative | 1472326 - 1472628 | 11325.8 |
| porin ompn | SAMEA3485113_01445 | Not Available | Positive | 1473257 - 1474450 | 43119.2 |
| chaperone protein | SAMEA3485113_01446 | Not Available | Positive | 1475042 - 1475893 | 31210.0 |
| two-component sensor kinase | SAMEA3485113_01447 | Not Available | Negative | 1476000 - 1477358 | 50828.7 |
| transcriptional regulatory protein yedw | SAMEA3485113_01448 | Not Available | Negative | 1477358 - 1478140 | 29442.4 |
| transthyretin-like protein | SAMEA3485113_01449 | Not Available | Positive | 1478162 - 1478575 | 15537.6 |
| putative oxidoreductase | SAMEA3485113_01450 | Not Available | Positive | 1478684 - 1479688 | 37399.9 |
| sulfite oxidase subunit yedz | SAMEA3485113_01451 | Not Available | Positive | 1479689 - 1480324 | 24058.7 |
| metal abc transporter substrate binding protein | SAMEA3485113_01452 | Not Available | Positive | 1480581 - 1481231 | 24784.2 |
| dipeptide abc transporter, substrate-binding protein | SAMEA3485113_01453 | Not Available | Positive | 1483848 - 1485455 | 60294.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





