Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor for flagellar operon | SAMEA3485113_01402 | Not Available | Negative | 1440245 - 1440964 | 27522.8 |
| flagellin | SAMEA3485113_01403 | Not Available | Negative | 1441128 - 1442834 | 57823.1 |
| flagellar capping protein | SAMEA3485113_01404 | Not Available | Positive | 1443100 - 1444506 | 48500.1 |
| flagellar protein flis | SAMEA3485113_01405 | Not Available | Positive | 1444531 - 1444941 | 15020.1 |
| flagellar protein flit | SAMEA3485113_01406 | Not Available | Positive | 1444941 - 1445306 | 13859.7 |
| alpha-amylase | SAMEA3485113_01407 | Not Available | Positive | 1445384 - 1446871 | 56617.2 |
| putative lipoprotein | SAMEA3485113_01408 | Not Available | Negative | 1446905 - 1447318 | 15002.1 |
| inner membrane protein | SAMEA3485113_01409 | Not Available | Positive | 1447505 - 1448710 | 44431.5 |
| sira family protein | SAMEA3485113_01410 | Not Available | Positive | 1448707 - 1448940 | 8639.5 |
| uncharacterised acr, cog2135 | SAMEA3485113_01411 | Not Available | Positive | 1449047 - 1449715 | 25000.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





