Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylglycinamide formyltransferase 2 | SAMEA3485113_01331 | Not Available | Positive | 1371564 - 1372742 | 42451.2 |
| khg/kdpg aldolase | SAMEA3485113_01332 | Not Available | Negative | 1372797 - 1373438 | 22271.3 |
| phosphogluconate dehydratase | SAMEA3485113_01333 | Not Available | Negative | 1373475 - 1375286 | 64642.9 |
| glucose-6-phosphate dehydrogenase | SAMEA3485113_01334 | Not Available | Negative | 1375521 - 1376996 | 55707.5 |
| uncharacterised protein | SAMEA3485113_01335 | Not Available | Negative | 1377162 - 1377311 | 5699.38 |
| putative hex-regulon repressor (rpir-family transcriptional regulator) | SAMEA3485113_01336 | Not Available | Positive | 1377334 - 1378203 | 31959.3 |
| pyruvate kinase | SAMEA3485113_01337 | Not Available | Positive | 1378331 - 1379773 | 51360.3 |
| lipid a biosynthesis (kdo)2-(lauroyl)-lipid iva acyltransferase | SAMEA3485113_01338 | Not Available | Negative | 1379905 - 1380876 | 37412.5 |
| putative peptidoglycan-binding peptidase | SAMEA3485113_01339 | Not Available | Negative | 1380995 - 1382317 | 49060.6 |
| high-affinity zinc transporter periplasmic protein | SAMEA3485113_01340 | Not Available | Negative | 1382333 - 1383319 | 36030.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





