Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine biosynthesis protein thii | SAMEA3485113_01235 | Not Available | Positive | 1272077 - 1273525 | 54976.3 |
| dj-1 family protein | SAMEA3485113_01236 | Not Available | Negative | 1273579 - 1274169 | 20793.2 |
| 2-dehydropantoate 2-reductase | SAMEA3485113_01237 | Not Available | Negative | 1274132 - 1275043 | 33902.8 |
| nucleotide-binding protein | SAMEA3485113_01238 | Not Available | Positive | 1275211 - 1275702 | 18344.9 |
| transport protein yajr | SAMEA3485113_01239 | Not Available | Negative | 1275830 - 1277194 | 48756.8 |
| protoheme ix farnesyltransferase | SAMEA3485113_01240 | Not Available | Negative | 1277343 - 1278233 | 32250.4 |
| cytochrome o ubiquinol oxidase subunit iv | SAMEA3485113_01241 | Not Available | Negative | 1278245 - 1278574 | 12030.2 |
| cytochrome o ubiquinol oxidase subunit iii | SAMEA3485113_01242 | Not Available | Negative | 1278574 - 1279188 | 22624.0 |
| cytochrome o ubiquinol oxidase subunit i | SAMEA3485113_01243 | Not Available | Negative | 1279178 - 1281169 | 74372.2 |
| cytochrome o ubiquinol oxidase subunit ii | SAMEA3485113_01244 | Not Available | Negative | 1281191 - 1282138 | 34917.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





