Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| riboflavin biosynthesis protein | SAMEA3485113_01225 | Not Available | Positive | 1262186 - 1263289 | 40436.8 |
| 6,7-dimethyl-8-ribityllumazine synthase | SAMEA3485113_01226 | Not Available | Positive | 1263378 - 1263848 | 16157.4 |
| n utilization substance protein b | SAMEA3485113_01227 | Not Available | Positive | 1263868 - 1264287 | 15689.9 |
| thiamine-monophosphate kinase | SAMEA3485113_01228 | Not Available | Positive | 1264365 - 1265342 | 35072.8 |
| phosphatidylglycerophosphatase a | SAMEA3485113_01229 | Not Available | Positive | 1265320 - 1265835 | 19332.2 |
| non-lee-encoded type iii effector | SAMEA3485113_01230 | Not Available | Negative | 1266012 - 1267583 | 60910.0 |
| putative aldo/keto reductase | SAMEA3485113_01231 | Not Available | Negative | 1267814 - 1268788 | 36422.2 |
| 1-deoxy-d-xylulose-5-phosphate synthase | SAMEA3485113_01232 | Not Available | Negative | 1268843 - 1270705 | 67606.9 |
| geranyltranstransferase | SAMEA3485113_01233 | Not Available | Negative | 1270730 - 1271629 | 32161.5 |
| exodeoxyribonuclease 7 small subunit | SAMEA3485113_01234 | Not Available | Negative | 1271629 - 1271871 | 8952.42 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





