Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i fumarate hydratase | SAMEA3485113_01164 | Not Available | Positive | 1198397 - 1200043 | 60302.0 |
| fumarate hydratase class ii | SAMEA3485113_01165 | Not Available | Positive | 1200186 - 1201589 | 50464.8 |
| dna replication terminus site-binding protein | SAMEA3485113_01166 | Not Available | Negative | 1201586 - 1202587 | 38662.9 |
| two component sensor kinase | SAMEA3485113_01167 | Not Available | Negative | 1202592 - 1203893 | 49257.7 |
| dna-binding transcriptional regulator rsta | SAMEA3485113_01168 | Not Available | Negative | 1203897 - 1204616 | 26691.3 |
| inner membrane protein associated with alginate biosynthesis | SAMEA3485113_01169 | Not Available | Positive | 1204745 - 1205080 | 12295.8 |
| putative short chain dehydrogenase | SAMEA3485113_01170 | Not Available | Negative | 1205077 - 1205799 | 26395.9 |
| arginine/ornithine antiporter | SAMEA3485113_01171 | Not Available | Negative | 1205836 - 1207218 | 49518.5 |
| protein ydgh | SAMEA3485113_01172 | Not Available | Negative | 1207404 - 1208348 | 33874.9 |
| nad(p) transhydrogenase subunit alpha | SAMEA3485113_01173 | Not Available | Positive | 1208872 - 1210404 | 54564.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





