Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quinate/shikimate dehydrogenase | SAMEA3485113_01080 | Not Available | Negative | 1112395 - 1113261 | 31215.6 |
| major facilitator superfamily protein | SAMEA3485113_01081 | Not Available | Negative | 1113273 - 1114538 | 46078.0 |
| major facilitator superfamily protein | SAMEA3485113_01082 | Not Available | Negative | 1114765 - 1115979 | 44576.6 |
| ydil protein | SAMEA3485113_01083 | Not Available | Negative | 1116078 - 1116434 | 13961.6 |
| inner membrane protein | SAMEA3485113_01085 | Not Available | Negative | 1116863 - 1117975 | 39833.7 |
| putative fad-binding oxidase | SAMEA3485113_01086 | Not Available | Positive | 1118364 - 1121420 | 113159.0 |
| esterase | SAMEA3485113_01087 | Not Available | Positive | 1121417 - 1121827 | 14912.2 |
| protein | SAMEA3485113_01088 | Not Available | Positive | 1121927 - 1122115 | 7266.74 |
| fe-s cluster assembly protein | SAMEA3485113_01090 | Not Available | Positive | 1122664 - 1123032 | 13286.8 |
| cysteine desulfurase activator complex subunit sufb | SAMEA3485113_01091 | Not Available | Positive | 1123041 - 1124528 | 54761.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





