Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid partitioning protein para | SAMEA3485113_01048 | Not Available | Positive | 1080018 - 1080662 | 23546.2 |
| uncharacterised protein | SAMEA3485113_01049 | Not Available | Positive | 1080656 - 1080931 | 10060.2 |
| putative resolvase | SAMEA3485113_01050 | Not Available | Negative | 1081068 - 1081520 | 16834.5 |
| putative type iii effector protein (ankyrin repeat protein b) | SAMEA3485113_01051 | Not Available | Negative | 1082205 - 1084103 | 70869.1 |
| threonine trna synthetase | SAMEA3485113_01052 | Not Available | Positive | 1084623 - 1086551 | 74004.4 |
| translation initiation factor if-3 | SAMEA3485113_01053 | Not Available | Positive | 1086663 - 1087097 | 16638.4 |
| 50s ribosomal subunit protein l35 | SAMEA3485113_01054 | Not Available | Positive | 1087194 - 1087391 | 7289.38 |
| 50s ribosomal protein l20 | SAMEA3485113_01055 | Not Available | Positive | 1087445 - 1087801 | 13497.7 |
| phenylalanyl-trna synthetase subunit alpha | SAMEA3485113_01057 | Not Available | Positive | 1088107 - 1089090 | 36803.9 |
| phenylalanyl-trna synthetase subunit beta | SAMEA3485113_01058 | Not Available | Positive | 1089105 - 1091492 | 87362.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





