Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yubp | SAMEA3485113_01037 | Not Available | Negative | 1071345 - 1071704 | 13701.4 |
| yubp | SAMEA3485113_01038 | Not Available | Negative | 1072436 - 1073257 | 31605.7 |
| uncharacterised protein | SAMEA3485113_01039 | Not Available | Negative | 1073376 - 1073663 | 11037.2 |
| uncharacterised protein | SAMEA3485113_01041 | Not Available | Negative | 1075330 - 1075500 | 6063.51 |
| dini family protein | SAMEA3485113_01042 | Not Available | Positive | 1075808 - 1076056 | 9502.3 |
| peptidase s24/s26a/s26b | SAMEA3485113_01043 | Not Available | Positive | 1076053 - 1076490 | 16220.1 |
| truncated impb protein | SAMEA3485113_01044 | Not Available | Positive | 1076490 - 1076765 | 10429.7 |
| dna-directed dna polymerase | SAMEA3485113_01045 | Not Available | Positive | 1076881 - 1078416 | 56742.5 |
| stable plasmid inheritance protein | SAMEA3485113_01046 | Not Available | Negative | 1078421 - 1078813 | 14618.6 |
| plasmid stability protein | SAMEA3485113_01047 | Not Available | Negative | 1078818 - 1079789 | 35670.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





